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Immune v2

High hierarchy

MNP

Low hierarchy

MNP

Description

mononuclear phagocytes including dendritic cells, monocytes and macrophages that have in common the property of phagocytosis

Curated Markers

HLA-DPA1
GeneCards NCBI Ensembl
HLA-DQA1
GeneCards NCBI Ensembl
FGL2
GeneCards NCBI Ensembl

Top Model Markers

MTRNR2L10
GeneCards NCBI Ensembl
AC022126.1
GeneCards NCBI Ensembl
LINC01644
GeneCards NCBI Ensembl
AC111006.1
GeneCards NCBI Ensembl
PAGE5
GeneCards NCBI Ensembl
IGKJ5
GeneCards NCBI Ensembl
TRBV11-1
GeneCards NCBI Ensembl
AL136456.1
GeneCards NCBI Ensembl
SOST
GeneCards NCBI Ensembl
AC008040.1
GeneCards NCBI Ensembl

Datasets

Martin et al. 2019
PubMed

Tissues

  • Intestine

Ontology CL:0000113

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Gene Expression and Percent Heatmap
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About Teichmann Lab in the Cellular Genetics programme

The Teichmann Lab is based in the Cellular Genetics programme of the Wellcome Sanger Institute. The programme uses cell-atlasing and cellular genetics to map cells in the human body combining cutting-edge methodologies and computational approaches.

About CellTypist

CellTypist was first developed as a platform for exploring tissue adaptation of cell types using scRNA-seq semi-automatic annotations. Now it's an open source tool for automated cell type annotations as well as a working group in charge of curating models and ontologies.

Citing CellTypist

Cross-tissue immune cell analysis reveals tissue-specific features in humans. Science 376, eabl5197 (2022). Link

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Working Group
  • Simone Webb, Laura Jardine (Haniffa Lab)
  • Benjamin Stewart, Kelvin Tuong (Clatworthy Lab)
  • Regina Hoo (Vento-Tormo Lab)
  • Chuan Xu, Cecilia Domínguez Conde, Kylie James, Jongeun Park, Elo Madissoon, Waradon Sungnak, Rasa Elmentaite, Peng He (Teichmann Lab)