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Immune v2

High hierarchy

Cycling cells

Low hierarchy

Cycling monocytes

Description

proliferating monocytes

Curated Markers

MKI67
GeneCards NCBI Ensembl
TOP2A
GeneCards NCBI Ensembl
S100A9
GeneCards NCBI Ensembl

Top Model Markers

SOX17
GeneCards NCBI Ensembl
TRBV10-1
GeneCards NCBI Ensembl
AC111006.1
GeneCards NCBI Ensembl
CTAG2
GeneCards NCBI Ensembl
SYN3
GeneCards NCBI Ensembl
TRBV10-2
GeneCards NCBI Ensembl
AC234582.1
GeneCards NCBI Ensembl
AL109615.2
GeneCards NCBI Ensembl
CMAHP
GeneCards NCBI Ensembl
AL136456.1
GeneCards NCBI Ensembl

Datasets

Smillie et al. 2019
PubMed

Tissues

  • Intestine

Ontology CL:0000576

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Gene Expression and Percent Heatmap
Generating Heatmap...
About Teichmann Lab in the Cellular Genetics programme

The Teichmann Lab is based in the Cellular Genetics programme of the Wellcome Sanger Institute. The programme uses cell-atlasing and cellular genetics to map cells in the human body combining cutting-edge methodologies and computational approaches.

About CellTypist

CellTypist was first developed as a platform for exploring tissue adaptation of cell types using scRNA-seq semi-automatic annotations. Now it's an open source tool for automated cell type annotations as well as a working group in charge of curating models and ontologies.

Citing CellTypist

Cross-tissue immune cell analysis reveals tissue-specific features in humans. Science 376, eabl5197 (2022). Link

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Working Group
  • Simone Webb, Laura Jardine (Haniffa Lab)
  • Benjamin Stewart, Kelvin Tuong (Clatworthy Lab)
  • Regina Hoo (Vento-Tormo Lab)
  • Chuan Xu, Cecilia Domínguez Conde, Kylie James, Jongeun Park, Elo Madissoon, Waradon Sungnak, Rasa Elmentaite, Peng He (Teichmann Lab)