CellTypist logo
  • Home
  • Learn
    Tutorials
    FAQ
    Code
  • Encyclopedia
    Immune cells
    v1
    v2
    Embryonic cells
    v1
  • Resources
    Models
    Training Data
    Visualization Download
    Python Package
  • Contact

Immune v2

High hierarchy

T cells

Low hierarchy

CD8a/a

Description

unconventional T lymphocytes with CD8 alpha/alpha homodimers binding MHC molecules

Curated Markers

ZNF683
GeneCards NCBI Ensembl
GNG4
GeneCards NCBI Ensembl
PDCD1
GeneCards NCBI Ensembl

Top Model Markers

CD27
GeneCards NCBI Ensembl
NUCB2
GeneCards NCBI Ensembl
LEF1
GeneCards NCBI Ensembl
ZNF683
GeneCards NCBI Ensembl
PRKCH
GeneCards NCBI Ensembl
TRBV10-2
GeneCards NCBI Ensembl
IGKJ5
GeneCards NCBI Ensembl
AC006115.2
GeneCards NCBI Ensembl
AC018754.1
GeneCards NCBI Ensembl
PAGE5
GeneCards NCBI Ensembl

Datasets

Park et al. 2020
PubMed

Tissues

  • Thymus

Ontology CL:0000084

BACK
Gene Expression and Percent Heatmap
Generating Heatmap...
About Teichmann Lab in the Cellular Genetics programme

The Teichmann Lab is based in the Cellular Genetics programme of the Wellcome Sanger Institute. The programme uses cell-atlasing and cellular genetics to map cells in the human body combining cutting-edge methodologies and computational approaches.

About CellTypist

CellTypist was first developed as a platform for exploring tissue adaptation of cell types using scRNA-seq semi-automatic annotations. Now it's an open source tool for automated cell type annotations as well as a working group in charge of curating models and ontologies.

Citing CellTypist

Cross-tissue immune cell analysis reveals tissue-specific features in humans. Science 376, eabl5197 (2022). Link

Important Links
  • Contact celltypist@sanger.ac.uk
  • Read our Cookies and Privacy policies
  • Read our Terms & Conditions
Working Group
  • Simone Webb, Laura Jardine (Haniffa Lab)
  • Benjamin Stewart, Kelvin Tuong (Clatworthy Lab)
  • Regina Hoo (Vento-Tormo Lab)
  • Chuan Xu, Cecilia Domínguez Conde, Kylie James, Jongeun Park, Elo Madissoon, Waradon Sungnak, Rasa Elmentaite, Peng He (Teichmann Lab)