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Immune v1

High hierarchy

Cycling cells

Low hierarchy

Cycling gamma-delta T cells

Description

proliferating gamma-delta (γδ) T lymphocytes

Curated Markers

MKI67
GeneCards NCBI Ensembl
TOP2A
GeneCards NCBI Ensembl
TRDC
GeneCards NCBI Ensembl

Top Model Markers

OR2A25
GeneCards NCBI Ensembl
DRAIC
GeneCards NCBI Ensembl
LCNL1
GeneCards NCBI Ensembl
C11orf72
GeneCards NCBI Ensembl
FCGR2C
GeneCards NCBI Ensembl
SYCP1
GeneCards NCBI Ensembl
LINC01644
GeneCards NCBI Ensembl
SIGLEC17P
GeneCards NCBI Ensembl
LINC02202
GeneCards NCBI Ensembl
PMCH
GeneCards NCBI Ensembl

Datasets

James et al. 2020
PubMed

Tissues

  • Colon

Ontology CL:0000798

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Gene Expression and Percent Heatmap
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About Teichmann Lab in the Cellular Genetics programme

The Teichmann Lab is based in the Cellular Genetics programme of the Wellcome Sanger Institute. The programme uses cell-atlasing and cellular genetics to map cells in the human body combining cutting-edge methodologies and computational approaches.

About CellTypist

CellTypist was first developed as a platform for exploring tissue adaptation of cell types using scRNA-seq semi-automatic annotations. Now it's an open source tool for automated cell type annotations as well as a working group in charge of curating models and ontologies.

Citing CellTypist

Cross-tissue immune cell analysis reveals tissue-specific features in humans. Science 376, eabl5197 (2022). Link

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Working Group
  • Simone Webb, Laura Jardine (Haniffa Lab)
  • Benjamin Stewart, Kelvin Tuong (Clatworthy Lab)
  • Regina Hoo (Vento-Tormo Lab)
  • Chuan Xu, Cecilia Domínguez Conde, Kylie James, Jongeun Park, Elo Madissoon, Waradon Sungnak, Rasa Elmentaite, Peng He (Teichmann Lab)